Cluster: CGMR045102_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045102
- CGC Family ID: CGCFAM_00666
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_267967 | k141_267967_11 | 9235 | 10344 | + | CE4 |
| TF | k141_267967 | k141_267967_12 | 10561 | 10938 | + | GntR |
| TC | k141_267967 | k141_267967_13 | 10941 | 11801 | + | 3.A.1.149.1 |
| NULL(UNKNOWN) | k141_267967 | k141_267967_14 | 11798 | 12412 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_267967 | k141_267967_15 | 12432 | 13028 | + | ABC2_membrane_5 |
| TC | k141_267967 | k141_267967_16 | 13084 | 13887 | + | 2.A.5.5.5 |
Gene ID: k141_267967_11
Type: CAZyme
Location: 9235 - 10344 (+)
Type: CAZyme
Location: 9235 - 10344 (+)
Gene ID: k141_267967_12
Type: TF
Location: 10561 - 10938 (+)
Type: TF
Location: 10561 - 10938 (+)
Gene ID: k141_267967_13
Type: TC
Location: 10941 - 11801 (+)
Type: TC
Location: 10941 - 11801 (+)
Gene ID: k141_267967_14
Type:
Location: 11798 - 12412 (+)
Type:
Location: 11798 - 12412 (+)
Gene ID: k141_267967_15
Type: pfam
Location: 12432 - 13028 (+)
Type: pfam
Location: 12432 - 13028 (+)
Gene ID: k141_267967_16
Type: TC
Location: 13084 - 13887 (+)
Type: TC
Location: 13084 - 13887 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sedimentibacteraceae
Genus
Sedimentibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.