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Cluster: CGMR041908_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_19149 k141_19149_1 53 1141 + GH5_4
CAZyme k141_19149 k141_19149_2 1161 3494 + GT2
NULL(UNKNOWN) k141_19149 k141_19149_3 3559 4677 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_19149 k141_19149_4 4679 6097 + 2.A.50.2.1
pfam k141_19149 k141_19149_5 6131 7324 + ALGX
TC k141_19149 k141_19149_6 7750 10332 + 3.A.9.1.2
TC k141_19149 k141_19149_7 10637 11323 + 2.A.115.2.8
TF k141_19149 k141_19149_8 11481 11942 + 0040517
TC k141_19149 k141_19149_9 11948 13279 + 2.A.66.1.37
Gene ID: k141_19149_1
Type: CAZyme
Location: 53 - 1141 (+)
Gene ID: k141_19149_2
Type: CAZyme
Location: 1161 - 3494 (+)
Gene ID: k141_19149_3
Type:
Location: 3559 - 4677 (+)
Gene ID: k141_19149_4
Type: TC
Location: 4679 - 6097 (+)
Gene ID: k141_19149_5
Type: pfam
Location: 6131 - 7324 (+)
Gene ID: k141_19149_6
Type: TC
Location: 7750 - 10332 (+)
Gene ID: k141_19149_7
Type: TC
Location: 10637 - 11323 (+)
Gene ID: k141_19149_8
Type: TF
Location: 11481 - 11942 (+)
Gene ID: k141_19149_9
Type: TC
Location: 11948 - 13279 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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