Cluster: CGMR035693_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR035693
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_11932 | k141_11932_127 | 120263 | 120754 | - | 9.B.105.1.1 |
| pfam | k141_11932 | k141_11932_128 | 120871 | 122241 | - | Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 | Hexapep_2 |
| peptidase | k141_11932 | k141_11932_129 | 122508 | 124145 | + | C26.964 |
| CAZyme | k141_11932 | k141_11932_130 | 124268 | 125203 | + | GT2 |
Gene ID: k141_11932_127
Type: TC
Location: 120263 - 120754 (-)
Type: TC
Location: 120263 - 120754 (-)
Gene ID: k141_11932_128
Type: pfam
Location: 120871 - 122241 (-)
Type: pfam
Location: 120871 - 122241 (-)
Gene ID: k141_11932_129
Type: peptidase
Location: 122508 - 124145 (+)
Type: peptidase
Location: 122508 - 124145 (+)
Gene ID: k141_11932_130
Type: CAZyme
Location: 124268 - 125203 (+)
Type: CAZyme
Location: 124268 - 125203 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905215245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_11932_127 | vegan > omnivore | 1.17555 | 0.01144 |
| k141_11932_127 | vegetarian > omnivore | 1.08284 | 0.01077 |