Cluster: CGMR035693_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR035693
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_11931 | k141_11931_193 | 195237 | 197075 | + | 3.A.18.1.1 |
| CAZyme | k141_11931 | k141_11931_194 | 197171 | 198565 | + | GH23 |
| NULL(UNKNOWN) | k141_11931 | k141_11931_195 | 198621 | 198764 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_11931 | k141_11931_196 | 198813 | 199136 | - | Ribosomal_S30AE |
| TC | k141_11931 | k141_11931_197 | 199378 | 200748 | - | 2.A.25.1.4 |
Gene ID: k141_11931_193
Type: TC
Location: 195237 - 197075 (+)
Type: TC
Location: 195237 - 197075 (+)
Gene ID: k141_11931_194
Type: CAZyme
Location: 197171 - 198565 (+)
Type: CAZyme
Location: 197171 - 198565 (+)
Gene ID: k141_11931_195
Type:
Location: 198621 - 198764 (+)
Type:
Location: 198621 - 198764 (+)
Gene ID: k141_11931_196
Type: pfam
Location: 198813 - 199136 (-)
Type: pfam
Location: 198813 - 199136 (-)
Gene ID: k141_11931_197
Type: TC
Location: 199378 - 200748 (-)
Type: TC
Location: 199378 - 200748 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905215245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_11931_194 | vegetarian > omnivore | 1.57956 | 0.01077 |
| k141_11931_195 | vegan > omnivore | 1.10290 | 0.01144 |
| k141_11931_195 | vegetarian > omnivore | 1.74106 | 0.01077 |