Cluster: CGMR035693_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR035693
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5035 | k141_5035_2 | 495 | 1949 | - | 2.A.47.3.1 |
| peptidase | k141_5035 | k141_5035_3 | 2120 | 3055 | - | S33.UNW |
| pfam | k141_5035 | k141_5035_4 | 3110 | 4225 | - | Semialdhyde_dh | Semialdhyde_dhC |
| CAZyme | k141_5035 | k141_5035_5 | 4364 | 6382 | - | GT41 |
| pfam | k141_5035 | k141_5035_6 | 6422 | 7783 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | k141_5035 | k141_5035_7 | 7926 | 8642 | + | 9.B.20.2.2 |
Gene ID: k141_5035_2
Type: TC
Location: 495 - 1949 (-)
Type: TC
Location: 495 - 1949 (-)
Gene ID: k141_5035_3
Type: peptidase
Location: 2120 - 3055 (-)
Type: peptidase
Location: 2120 - 3055 (-)
Gene ID: k141_5035_4
Type: pfam
Location: 3110 - 4225 (-)
Type: pfam
Location: 3110 - 4225 (-)
Gene ID: k141_5035_5
Type: CAZyme
Location: 4364 - 6382 (-)
Type: CAZyme
Location: 4364 - 6382 (-)
Gene ID: k141_5035_6
Type: pfam
Location: 6422 - 7783 (-)
Type: pfam
Location: 6422 - 7783 (-)
Gene ID: k141_5035_7
Type: TC
Location: 7926 - 8642 (+)
Type: TC
Location: 7926 - 8642 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905215245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_5035_7 | vegetarian > omnivore | 1.12489 | 0.01077 |