Cluster: CGMR035693_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR035693
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_123404 | k141_123404_50 | 43366 | 44397 | + | GT9 |
| TC | k141_123404 | k141_123404_51 | 44347 | 45012 | - | 2.A.115.2.7 |
| pfam | k141_123404 | k141_123404_52 | 45203 | 46744 | + | PFL-like | YjjI-like |
| TC | k141_123404 | k141_123404_53 | 46786 | 48651 | - | 2.A.16.2.2 |
| TC | k141_123404 | k141_123404_54 | 48651 | 48956 | - | 9.B.21.2.1 |
Gene ID: k141_123404_50
Type: CAZyme
Location: 43366 - 44397 (+)
Type: CAZyme
Location: 43366 - 44397 (+)
Gene ID: k141_123404_51
Type: TC
Location: 44347 - 45012 (-)
Type: TC
Location: 44347 - 45012 (-)
Gene ID: k141_123404_52
Type: pfam
Location: 45203 - 46744 (+)
Type: pfam
Location: 45203 - 46744 (+)
Gene ID: k141_123404_53
Type: TC
Location: 46786 - 48651 (-)
Type: TC
Location: 46786 - 48651 (-)
Gene ID: k141_123404_54
Type: TC
Location: 48651 - 48956 (-)
Type: TC
Location: 48651 - 48956 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905215245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_123404_50 | vegan > omnivore | 1.31832 | 0.01144 |
| k141_123404_50 | vegetarian > omnivore | 1.03454 | 0.01077 |
| k141_123404_51 | vegan > omnivore | 1.24591 | 0.01144 |
| k141_123404_51 | vegetarian > omnivore | 1.21498 | 0.01077 |