Cluster: CGMR035693_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR035693
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_9108 | k141_9108_7 | 7439 | 9838 | + | GT51 |
| TC | k141_9108 | k141_9108_8 | 10057 | 11961 | + | 2.A.108.2.10 |
| TC | k141_9108 | k141_9108_9 | 11990 | 12511 | + | 2.A.108.2.10 |
| pfam | k141_9108 | k141_9108_10 | 12627 | 14021 | + | YHS | FtrD-like |
| TC | k141_9108 | k141_9108_11 | 14021 | 15361 | + | 3.A.1.122.8 |
| pfam | k141_9108 | k141_9108_12 | 15348 | 16481 | + | FtsX | MacB_PCD |
| TC | k141_9108 | k141_9108_13 | 16483 | 17154 | + | 3.A.1.122.8 |
Gene ID: k141_9108_7
Type: CAZyme
Location: 7439 - 9838 (+)
Type: CAZyme
Location: 7439 - 9838 (+)
Gene ID: k141_9108_8
Type: TC
Location: 10057 - 11961 (+)
Type: TC
Location: 10057 - 11961 (+)
Gene ID: k141_9108_9
Type: TC
Location: 11990 - 12511 (+)
Type: TC
Location: 11990 - 12511 (+)
Gene ID: k141_9108_10
Type: pfam
Location: 12627 - 14021 (+)
Type: pfam
Location: 12627 - 14021 (+)
Gene ID: k141_9108_11
Type: TC
Location: 14021 - 15361 (+)
Type: TC
Location: 14021 - 15361 (+)
Gene ID: k141_9108_12
Type: pfam
Location: 15348 - 16481 (+)
Type: pfam
Location: 15348 - 16481 (+)
Gene ID: k141_9108_13
Type: TC
Location: 16483 - 17154 (+)
Type: TC
Location: 16483 - 17154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905215245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_9108_8 | vegetarian > vegan | 1.02984 | 0.03847 |
| k141_9108_10 | vegetarian > vegan | 1.81803 | 0.02034 |