Cluster: CGMR030438_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR030438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_31929 | k141_31929_28 | 42376 | 43971 | - | GH31_19 |
| CAZyme | k141_31929 | k141_31929_29 | 43993 | 46149 | - | GH89 |
| pfam | k141_31929 | k141_31929_30 | 46146 | 47717 | - | DUF4832 | DUF4874 |
| CAZyme | k141_31929 | k141_31929_31 | 47719 | 48906 | - | GH16_24 |
| pfam | k141_31929 | k141_31929_32 | 48992 | 50464 | - | SusD_RagB | SusD-like_3 |
| TC | k141_31929 | k141_31929_33 | 50497 | 53976 | - | 1.B.14.6.1 |
Gene ID: k141_31929_28
Type: CAZyme
Location: 42376 - 43971 (-)
Type: CAZyme
Location: 42376 - 43971 (-)
Gene ID: k141_31929_29
Type: CAZyme
Location: 43993 - 46149 (-)
Type: CAZyme
Location: 43993 - 46149 (-)
Gene ID: k141_31929_30
Type: pfam
Location: 46146 - 47717 (-)
Type: pfam
Location: 46146 - 47717 (-)
Gene ID: k141_31929_31
Type: CAZyme
Location: 47719 - 48906 (-)
Type: CAZyme
Location: 47719 - 48906 (-)
Gene ID: k141_31929_32
Type: pfam
Location: 48992 - 50464 (-)
Type: pfam
Location: 48992 - 50464 (-)
Gene ID: k141_31929_33
Type: TC
Location: 50497 - 53976 (-)
Type: TC
Location: 50497 - 53976 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.