Cluster: CGMR030438_CGC65
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR030438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_119003 | k141_119003_32 | 40160 | 43588 | + | 1.B.14.6.1 |
| pfam | k141_119003 | k141_119003_33 | 43595 | 45427 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_119003 | k141_119003_34 | 45444 | 46118 | + | DUF3823 | DUF3823_C |
| CAZyme | k141_119003 | k141_119003_35 | 46319 | 49276 | + | GH43_3 |
| CAZyme | k141_119003 | k141_119003_36 | 49313 | 51124 | + | GH2 |
| CAZyme | k141_119003 | k141_119003_37 | 51129 | 52982 | + | GH2 |
Gene ID: k141_119003_32
Type: TC
Location: 40160 - 43588 (+)
Type: TC
Location: 40160 - 43588 (+)
Gene ID: k141_119003_33
Type: pfam
Location: 43595 - 45427 (+)
Type: pfam
Location: 43595 - 45427 (+)
Gene ID: k141_119003_34
Type: pfam
Location: 45444 - 46118 (+)
Type: pfam
Location: 45444 - 46118 (+)
Gene ID: k141_119003_35
Type: CAZyme
Location: 46319 - 49276 (+)
Type: CAZyme
Location: 46319 - 49276 (+)
Gene ID: k141_119003_36
Type: CAZyme
Location: 49313 - 51124 (+)
Type: CAZyme
Location: 49313 - 51124 (+)
Gene ID: k141_119003_37
Type: CAZyme
Location: 51129 - 52982 (+)
Type: CAZyme
Location: 51129 - 52982 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.