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Cluster: CGMR030438_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_155026 k141_155026_7 10814 14017 - 1.B.14.6.1
CAZyme k141_155026 k141_155026_8 15126 17054 + PL33_1
CAZyme k141_155026 k141_155026_9 17062 18273 + GH88
pfam k141_155026 k141_155026_10 18534 19433 + Sulfatase | Phosphodiest | Metalloenzyme
TF k141_155026 k141_155026_11 19426 23457 - HTH_AraC | HTH_AraC
TC k141_155026 k141_155026_12 23542 24576 + 3.A.1.13.2
TC k141_155026 k141_155026_13 24584 25627 + 3.A.1.13.2
TC k141_155026 k141_155026_14 25684 27036 + 2.A.66.1.32
Gene ID: k141_155026_7
Type: TC
Location: 10814 - 14017 (-)
Gene ID: k141_155026_8
Type: CAZyme
Location: 15126 - 17054 (+)
Gene ID: k141_155026_9
Type: CAZyme
Location: 17062 - 18273 (+)
Gene ID: k141_155026_10
Type: pfam
Location: 18534 - 19433 (+)
Gene ID: k141_155026_11
Type: TF
Location: 19426 - 23457 (-)
Gene ID: k141_155026_12
Type: TC
Location: 23542 - 24576 (+)
Gene ID: k141_155026_13
Type: TC
Location: 24584 - 25627 (+)
Gene ID: k141_155026_14
Type: TC
Location: 25684 - 27036 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_155026_8 vegetarian > omnivore 1.13639 0.00085

🧭 Explore Read Mapping of CGC

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