Cluster: CGMR030438_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR030438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_130169 | k141_130169_64 | 76629 | 77603 | - | 2.A.7.18.1 |
| pfam | k141_130169 | k141_130169_65 | 77615 | 79198 | - | Choline_kinase | APH | NTP_transf_3 |
| CAZyme | k141_130169 | k141_130169_66 | 79256 | 80095 | + | GT23 |
| NULL(UNKNOWN) | k141_130169 | k141_130169_67 | 80073 | 81020 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_130169 | k141_130169_68 | 81030 | 82025 | - | Acyl_transf_3 |
| TC | k141_130169 | k141_130169_69 | 82073 | 83521 | - | 2.A.66.2.6 |
Gene ID: k141_130169_64
Type: TC
Location: 76629 - 77603 (-)
Type: TC
Location: 76629 - 77603 (-)
Gene ID: k141_130169_65
Type: pfam
Location: 77615 - 79198 (-)
Type: pfam
Location: 77615 - 79198 (-)
Gene ID: k141_130169_66
Type: CAZyme
Location: 79256 - 80095 (+)
Type: CAZyme
Location: 79256 - 80095 (+)
Gene ID: k141_130169_67
Type:
Location: 80073 - 81020 (-)
Type:
Location: 80073 - 81020 (-)
Gene ID: k141_130169_68
Type: pfam
Location: 81030 - 82025 (-)
Type: pfam
Location: 81030 - 82025 (-)
Gene ID: k141_130169_69
Type: TC
Location: 82073 - 83521 (-)
Type: TC
Location: 82073 - 83521 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_130169_64 | vegetarian > vegan | 15.39229 | 0.00455 |
| k141_130169_65 | vegetarian > vegan | 14.88706 | 0.00455 |
| k141_130169_67 | vegetarian > omnivore | 1.08623 | 0.00085 |
| k141_130169_67 | vegetarian > vegan | 15.24754 | 0.00455 |
| k141_130169_68 | vegetarian > vegan | 14.88683 | 0.00455 |
| k141_130169_69 | vegetarian > vegan | 2.10881 | 0.00455 |