Cluster: CGMR030438_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR030438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_130169 | k141_130169_45 | 58008 | 59663 | + | 4.C.1.1.7 |
| pfam | k141_130169 | k141_130169_46 | 59753 | 61126 | + | AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | KARI_N |
| pfam | k141_130169 | k141_130169_47 | 61192 | 61965 | + | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | k141_130169 | k141_130169_48 | 61968 | 62966 | + | GT2 |
| TC | k141_130169 | k141_130169_49 | 63070 | 65589 | - | 9.B.144.1.4 |
| CAZyme | k141_130169 | k141_130169_50 | 65616 | 66377 | - | GT2 |
Gene ID: k141_130169_45
Type: TC
Location: 58008 - 59663 (+)
Type: TC
Location: 58008 - 59663 (+)
Gene ID: k141_130169_46
Type: pfam
Location: 59753 - 61126 (+)
Type: pfam
Location: 59753 - 61126 (+)
Gene ID: k141_130169_47
Type: pfam
Location: 61192 - 61965 (+)
Type: pfam
Location: 61192 - 61965 (+)
Gene ID: k141_130169_48
Type: CAZyme
Location: 61968 - 62966 (+)
Type: CAZyme
Location: 61968 - 62966 (+)
Gene ID: k141_130169_49
Type: TC
Location: 63070 - 65589 (-)
Type: TC
Location: 63070 - 65589 (-)
Gene ID: k141_130169_50
Type: CAZyme
Location: 65616 - 66377 (-)
Type: CAZyme
Location: 65616 - 66377 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.