Cluster: CGMR030438_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR030438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_147516 | k141_147516_14 | 14503 | 16140 | + | 3.A.1.121.4 |
| pfam | k141_147516 | k141_147516_15 | 16137 | 17615 | - | DUF3943 |
| TC | k141_147516 | k141_147516_16 | 17772 | 18383 | + | 1.A.62.2.1 |
| pfam | k141_147516 | k141_147516_17 | 18402 | 19472 | + | Asparaginase | Asparaginase_C |
| pfam | k141_147516 | k141_147516_18 | 19503 | 20306 | + | Lactamase_B | Lactamase_B_2 |
| CAZyme | k141_147516 | k141_147516_19 | 21323 | 22528 | + | GT105 |
Gene ID: k141_147516_14
Type: TC
Location: 14503 - 16140 (+)
Type: TC
Location: 14503 - 16140 (+)
Gene ID: k141_147516_15
Type: pfam
Location: 16137 - 17615 (-)
Type: pfam
Location: 16137 - 17615 (-)
Gene ID: k141_147516_16
Type: TC
Location: 17772 - 18383 (+)
Type: TC
Location: 17772 - 18383 (+)
Gene ID: k141_147516_17
Type: pfam
Location: 18402 - 19472 (+)
Type: pfam
Location: 18402 - 19472 (+)
Gene ID: k141_147516_18
Type: pfam
Location: 19503 - 20306 (+)
Type: pfam
Location: 19503 - 20306 (+)
Gene ID: k141_147516_19
Type: CAZyme
Location: 21323 - 22528 (+)
Type: CAZyme
Location: 21323 - 22528 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_147516_19 | vegetarian > omnivore | 1.19279 | 0.00085 |