Cluster: CGMR030438_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR030438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_124597 | k141_124597_13 | 13400 | 15769 | - | GH92 |
| CAZyme | k141_124597 | k141_124597_14 | 15871 | 18159 | - | GH92 |
| CAZyme | k141_124597 | k141_124597_15 | 18177 | 20504 | - | GH92 |
| CAZyme | k141_124597 | k141_124597_16 | 20523 | 21629 | - | CBM32 |
| pfam | k141_124597 | k141_124597_17 | 22785 | 24578 | - | SusD_RagB | SusD-like_3 |
| TC | k141_124597 | k141_124597_18 | 24598 | 27591 | - | 1.B.14.6.1 |
Gene ID: k141_124597_13
Type: CAZyme
Location: 13400 - 15769 (-)
Type: CAZyme
Location: 13400 - 15769 (-)
Gene ID: k141_124597_14
Type: CAZyme
Location: 15871 - 18159 (-)
Type: CAZyme
Location: 15871 - 18159 (-)
Gene ID: k141_124597_15
Type: CAZyme
Location: 18177 - 20504 (-)
Type: CAZyme
Location: 18177 - 20504 (-)
Gene ID: k141_124597_16
Type: CAZyme
Location: 20523 - 21629 (-)
Type: CAZyme
Location: 20523 - 21629 (-)
Gene ID: k141_124597_17
Type: pfam
Location: 22785 - 24578 (-)
Type: pfam
Location: 22785 - 24578 (-)
Gene ID: k141_124597_18
Type: TC
Location: 24598 - 27591 (-)
Type: TC
Location: 24598 - 27591 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.