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Cluster: CGMR030438_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39512 k141_39512_4 3045 4262 - GH154
CAZyme k141_39512 k141_39512_5 4272 5468 - GH88
TC k141_39512 k141_39512_6 6099 7289 + 3.A.1.7.5
TC k141_39512 k141_39512_7 7298 8185 + 3.A.1.7.2
TC k141_39512 k141_39512_8 8199 8951 + 3.A.1.7.1
pfam k141_39512 k141_39512_9 9039 9716 + PhoU | PhoU
pfam k141_39512 k141_39512_10 9756 10958 + Porin_O_P
CAZyme k141_39512 k141_39512_11 10959 13388 - GH95
CAZyme k141_39512 k141_39512_12 13397 14491 - GH5_38
TC k141_39512 k141_39512_13 14538 16385 - 3.A.1.135.5
NULL(UNKNOWN) k141_39512 k141_39512_14 16680 17156 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_39512 k141_39512_15 17153 18226 + Radical_SAM | SPASM
CAZyme k141_39512 k141_39512_16 18336 20111 + GH123
Gene ID: k141_39512_4
Type: CAZyme
Location: 3045 - 4262 (-)
Gene ID: k141_39512_5
Type: CAZyme
Location: 4272 - 5468 (-)
Gene ID: k141_39512_6
Type: TC
Location: 6099 - 7289 (+)
Gene ID: k141_39512_7
Type: TC
Location: 7298 - 8185 (+)
Gene ID: k141_39512_8
Type: TC
Location: 8199 - 8951 (+)
Gene ID: k141_39512_9
Type: pfam
Location: 9039 - 9716 (+)
Gene ID: k141_39512_10
Type: pfam
Location: 9756 - 10958 (+)
Gene ID: k141_39512_11
Type: CAZyme
Location: 10959 - 13388 (-)
Gene ID: k141_39512_12
Type: CAZyme
Location: 13397 - 14491 (-)
Gene ID: k141_39512_13
Type: TC
Location: 14538 - 16385 (-)
Gene ID: k141_39512_14
Type:
Location: 16680 - 17156 (+)
Gene ID: k141_39512_15
Type: pfam
Location: 17153 - 18226 (+)
Gene ID: k141_39512_16
Type: CAZyme
Location: 18336 - 20111 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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