Cluster: CGMR030438_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR030438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_138816 | k141_138816_10 | 12288 | 13922 | - | GH33 |
| sulfatase | k141_138816 | k141_138816_11 | 13929 | 15365 | - | S1_7 |
| CAZyme | k141_138816 | k141_138816_12 | 15418 | 16545 | - | GH33 |
| pfam | k141_138816 | k141_138816_13 | 16567 | 17505 | - | DHDPS |
| pfam | k141_138816 | k141_138816_14 | 17515 | 18969 | - | SusD_RagB | SusD-like_3 |
| TC | k141_138816 | k141_138816_15 | 19006 | 22170 | - | 1.B.14.6.1 |
| pfam | k141_138816 | k141_138816_16 | 22255 | 23166 | - | DHDPS |
| TC | k141_138816 | k141_138816_17 | 23171 | 25762 | - | 2.A.21.3.7 |
Gene ID: k141_138816_10
Type: CAZyme
Location: 12288 - 13922 (-)
Type: CAZyme
Location: 12288 - 13922 (-)
Gene ID: k141_138816_11
Type: sulfatase
Location: 13929 - 15365 (-)
Type: sulfatase
Location: 13929 - 15365 (-)
Gene ID: k141_138816_12
Type: CAZyme
Location: 15418 - 16545 (-)
Type: CAZyme
Location: 15418 - 16545 (-)
Gene ID: k141_138816_13
Type: pfam
Location: 16567 - 17505 (-)
Type: pfam
Location: 16567 - 17505 (-)
Gene ID: k141_138816_14
Type: pfam
Location: 17515 - 18969 (-)
Type: pfam
Location: 17515 - 18969 (-)
Gene ID: k141_138816_15
Type: TC
Location: 19006 - 22170 (-)
Type: TC
Location: 19006 - 22170 (-)
Gene ID: k141_138816_16
Type: pfam
Location: 22255 - 23166 (-)
Type: pfam
Location: 22255 - 23166 (-)
Gene ID: k141_138816_17
Type: TC
Location: 23171 - 25762 (-)
Type: TC
Location: 23171 - 25762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.