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Cluster: CGMR030438_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_134806 k141_134806_33 40926 41633 - GT26
pfam k141_134806 k141_134806_34 41630 42058 - Hexapep | Hexapep_2
pfam k141_134806 k141_134806_35 42055 42960 - ATPgrasp_TupA
CAZyme k141_134806 k141_134806_36 43020 44069 - GT4
NULL(UNKNOWN) k141_134806 k141_134806_37 44056 45345 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_134806 k141_134806_38 45323 46297 - GT4
NULL(UNKNOWN) k141_134806 k141_134806_39 46300 47829 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_134806 k141_134806_40 47840 49048 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC k141_134806 k141_134806_41 49063 50199 - 9.B.146.1.4
Gene ID: k141_134806_33
Type: CAZyme
Location: 40926 - 41633 (-)
Gene ID: k141_134806_34
Type: pfam
Location: 41630 - 42058 (-)
Gene ID: k141_134806_35
Type: pfam
Location: 42055 - 42960 (-)
Gene ID: k141_134806_36
Type: CAZyme
Location: 43020 - 44069 (-)
Gene ID: k141_134806_37
Type:
Location: 44056 - 45345 (-)
Gene ID: k141_134806_38
Type: CAZyme
Location: 45323 - 46297 (-)
Gene ID: k141_134806_39
Type:
Location: 46300 - 47829 (-)
Gene ID: k141_134806_40
Type: pfam
Location: 47840 - 49048 (-)
Gene ID: k141_134806_41
Type: TC
Location: 49063 - 50199 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_134806_33 vegetarian > omnivore 1.25970 0.00085
k141_134806_34 vegetarian > omnivore 1.12288 0.00085
k141_134806_38 vegetarian > omnivore 1.49912 0.00085

🧭 Explore Read Mapping of CGC

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