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Cluster: CGMR025896_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_139139 k141_139139_9 9311 12718 - GH146
CAZyme k141_139139 k141_139139_10 12750 15947 - GH38
pfam k141_139139 k141_139139_11 15944 16966 - BT_3987-like_N | DUF5627
pfam k141_139139 k141_139139_12 16981 18675 - SusD_RagB | SusD-like_3
TC k141_139139 k141_139139_13 18687 21779 - 1.B.14.6.1
pfam k141_139139 k141_139139_14 21798 23651 - SusD_RagB | SusD-like_3
TC k141_139139 k141_139139_15 23664 26783 - 1.B.14.6.1
sulfatase k141_139139 k141_139139_16 26829 28220 - S1_14
CAZyme k141_139139 k141_139139_17 28252 31401 - GH163
pfam k141_139139 k141_139139_18 31432 33681 - BACON | BACON | BACON_2
CAZyme k141_139139 k141_139139_19 33722 35284 - GH49
Gene ID: k141_139139_9
Type: CAZyme
Location: 9311 - 12718 (-)
Gene ID: k141_139139_10
Type: CAZyme
Location: 12750 - 15947 (-)
Gene ID: k141_139139_11
Type: pfam
Location: 15944 - 16966 (-)
Gene ID: k141_139139_12
Type: pfam
Location: 16981 - 18675 (-)
Gene ID: k141_139139_13
Type: TC
Location: 18687 - 21779 (-)
Gene ID: k141_139139_14
Type: pfam
Location: 21798 - 23651 (-)
Gene ID: k141_139139_15
Type: TC
Location: 23664 - 26783 (-)
Gene ID: k141_139139_16
Type: sulfatase
Location: 26829 - 28220 (-)
Gene ID: k141_139139_17
Type: CAZyme
Location: 28252 - 31401 (-)
Gene ID: k141_139139_18
Type: pfam
Location: 31432 - 33681 (-)
Gene ID: k141_139139_19
Type: CAZyme
Location: 33722 - 35284 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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