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Cluster: CGMR025896_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_24005 k141_24005_29 42372 43622 - CE9
TC k141_24005 k141_24005_30 43624 45090 - 2.A.1.14.25
NULL(UNKNOWN) k141_24005 k141_24005_31 45103 46074 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_24005 k141_24005_32 46092 46856 - Glucosamine_iso
CAZyme k141_24005 k141_24005_33 46887 48668 - PL1_2
pfam k141_24005 k141_24005_34 48681 50681 - fn3
TC k141_24005 k141_24005_35 50698 52641 - 8.A.46.1.3
TC k141_24005 k141_24005_36 52644 55832 - 1.B.14.6.1
CAZyme k141_24005 k141_24005_37 55855 56646 - CE12
CAZyme k141_24005 k141_24005_38 56652 57419 - CE12
TF k141_24005 k141_24005_39 57669 58739 + LacI
CAZyme k141_24005 k141_24005_40 58852 60432 + PL1_2
CAZyme k141_24005 k141_24005_41 60438 62024 + PL10_2
Gene ID: k141_24005_29
Type: CAZyme
Location: 42372 - 43622 (-)
Gene ID: k141_24005_30
Type: TC
Location: 43624 - 45090 (-)
Gene ID: k141_24005_31
Type:
Location: 45103 - 46074 (-)
Gene ID: k141_24005_32
Type: pfam
Location: 46092 - 46856 (-)
Gene ID: k141_24005_33
Type: CAZyme
Location: 46887 - 48668 (-)
Gene ID: k141_24005_34
Type: pfam
Location: 48681 - 50681 (-)
Gene ID: k141_24005_35
Type: TC
Location: 50698 - 52641 (-)
Gene ID: k141_24005_36
Type: TC
Location: 52644 - 55832 (-)
Gene ID: k141_24005_37
Type: CAZyme
Location: 55855 - 56646 (-)
Gene ID: k141_24005_38
Type: CAZyme
Location: 56652 - 57419 (-)
Gene ID: k141_24005_39
Type: TF
Location: 57669 - 58739 (+)
Gene ID: k141_24005_40
Type: CAZyme
Location: 58852 - 60432 (+)
Gene ID: k141_24005_41
Type: CAZyme
Location: 60438 - 62024 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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