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Cluster: CGMR025896_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_105505 k141_105505_12 16593 18362 - GH123
CAZyme k141_105505 k141_105505_13 18380 23074 - GH3 | GH89
pfam k141_105505 k141_105505_14 23076 23951 - Exo_endo_phos
pfam k141_105505 k141_105505_15 24065 25852 - SusD_RagB | SusD-like_3
TC k141_105505 k141_105505_16 25866 29342 - 1.B.14.6.1
Gene ID: k141_105505_12
Type: CAZyme
Location: 16593 - 18362 (-)
Gene ID: k141_105505_13
Type: CAZyme
Location: 18380 - 23074 (-)
Gene ID: k141_105505_14
Type: pfam
Location: 23076 - 23951 (-)
Gene ID: k141_105505_15
Type: pfam
Location: 24065 - 25852 (-)
Gene ID: k141_105505_16
Type: TC
Location: 25866 - 29342 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_105505_12 vegan > omnivore 1.04717 0.00450
k141_105505_12 vegetarian > omnivore 1.10836 0.01949
k141_105505_13 vegan > omnivore 1.82709 0.00450
k141_105505_14 vegan > omnivore 2.15847 0.00364
k141_105505_14 vegetarian > omnivore 1.32246 0.01949
k141_105505_15 vegan > omnivore 1.40924 0.00364
k141_105505_16 vegan > omnivore 1.73017 0.00450

🧭 Explore Read Mapping of CGC

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