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Cluster: CGMR025896_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_66696 k141_66696_42 53262 54368 - GH171
pfam k141_66696 k141_66696_43 54430 55542 - RF-1 | PCRF
pfam k141_66696 k141_66696_44 55548 56180 - Cytidylate_kin2
TC k141_66696 k141_66696_45 56184 57557 - 2.A.66.1.32
pfam k141_66696 k141_66696_46 57763 59238 - tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C
peptidase k141_66696 k141_66696_47 59305 59979 - M15.UPD
TC k141_66696 k141_66696_48 60160 61725 + 1.I.1.1.3
pfam k141_66696 k141_66696_49 61817 65041 + TMEM260-like
pfam k141_66696 k141_66696_50 65505 66539 + AsnA
TC k141_66696 k141_66696_51 67294 68958 - 4.C.1.1.14
Gene ID: k141_66696_42
Type: CAZyme
Location: 53262 - 54368 (-)
Gene ID: k141_66696_43
Type: pfam
Location: 54430 - 55542 (-)
Gene ID: k141_66696_44
Type: pfam
Location: 55548 - 56180 (-)
Gene ID: k141_66696_45
Type: TC
Location: 56184 - 57557 (-)
Gene ID: k141_66696_46
Type: pfam
Location: 57763 - 59238 (-)
Gene ID: k141_66696_47
Type: peptidase
Location: 59305 - 59979 (-)
Gene ID: k141_66696_48
Type: TC
Location: 60160 - 61725 (+)
Gene ID: k141_66696_49
Type: pfam
Location: 61817 - 65041 (+)
Gene ID: k141_66696_50
Type: pfam
Location: 65505 - 66539 (+)
Gene ID: k141_66696_51
Type: TC
Location: 67294 - 68958 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_66696_47 vegetarian > omnivore 1.03924 0.01949

🧭 Explore Read Mapping of CGC

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