Cluster: CGMR025896_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR025896
- CGC Family ID: CGCFAM_01682
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2895 | k141_2895_132 | 150261 | 150686 | + | 1.E.19.1.15 |
| NULL(UNKNOWN) | k141_2895 | k141_2895_133 | 150679 | 151080 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_2895 | k141_2895_134 | 151118 | 152596 | + | 3.A.11.1.3 |
| pfam | k141_2895 | k141_2895_135 | 152554 | 153738 | + | Cons_hypoth95 | Methyltransf_25 | Thump_like |
| TC | k141_2895 | k141_2895_136 | 153769 | 155073 | + | 9.B.126.2.2 |
| pfam | k141_2895 | k141_2895_137 | 155094 | 155873 | + | GFO_IDH_MocA | F420_oxidored | DUF2520 |
| pfam | k141_2895 | k141_2895_138 | 155849 | 156394 | + | Hydrolase_3 | HAD_2 |
| CAZyme | k141_2895 | k141_2895_139 | 156497 | 159610 | + | GH2 |
Gene ID: k141_2895_132
Type: TC
Location: 150261 - 150686 (+)
Type: TC
Location: 150261 - 150686 (+)
Gene ID: k141_2895_133
Type:
Location: 150679 - 151080 (+)
Type:
Location: 150679 - 151080 (+)
Gene ID: k141_2895_134
Type: TC
Location: 151118 - 152596 (+)
Type: TC
Location: 151118 - 152596 (+)
Gene ID: k141_2895_135
Type: pfam
Location: 152554 - 153738 (+)
Type: pfam
Location: 152554 - 153738 (+)
Gene ID: k141_2895_136
Type: TC
Location: 153769 - 155073 (+)
Type: TC
Location: 153769 - 155073 (+)
Gene ID: k141_2895_137
Type: pfam
Location: 155094 - 155873 (+)
Type: pfam
Location: 155094 - 155873 (+)
Gene ID: k141_2895_138
Type: pfam
Location: 155849 - 156394 (+)
Type: pfam
Location: 155849 - 156394 (+)
Gene ID: k141_2895_139
Type: CAZyme
Location: 156497 - 159610 (+)
Type: CAZyme
Location: 156497 - 159610 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp001941065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.