Cluster: CGMR025896_CGC45
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR025896
- CGC Family ID: CGCFAM_08258
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_55146 | k141_55146_1 | 3 | 914 | - | CBM67 |
| CAZyme | k141_55146 | k141_55146_2 | 1019 | 2464 | - | GH28 |
| CAZyme | k141_55146 | k141_55146_3 | 2477 | 3979 | - | GH28 |
| pfam | k141_55146 | k141_55146_4 | 4024 | 5667 | - | SusD_RagB | SusD-like_3 |
| TC | k141_55146 | k141_55146_5 | 5686 | 9063 | - | 1.B.14.6.2 |
Gene ID: k141_55146_1
Type: CAZyme
Location: 3 - 914 (-)
Type: CAZyme
Location: 3 - 914 (-)
Gene ID: k141_55146_2
Type: CAZyme
Location: 1019 - 2464 (-)
Type: CAZyme
Location: 1019 - 2464 (-)
Gene ID: k141_55146_3
Type: CAZyme
Location: 2477 - 3979 (-)
Type: CAZyme
Location: 2477 - 3979 (-)
Gene ID: k141_55146_4
Type: pfam
Location: 4024 - 5667 (-)
Type: pfam
Location: 4024 - 5667 (-)
Gene ID: k141_55146_5
Type: TC
Location: 5686 - 9063 (-)
Type: TC
Location: 5686 - 9063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp001941065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.