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Cluster: CGMR025896_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_92532 k141_92532_17 27544 29391 + GH110
CAZyme k141_92532 k141_92532_18 29402 31264 + GH110
CAZyme k141_92532 k141_92532_19 31273 32385 + GH43_24
TC k141_92532 k141_92532_20 32446 35523 + 1.B.14.6.1
TC k141_92532 k141_92532_21 35527 37134 + 8.A.46.3.2
pfam k141_92532 k141_92532_22 37153 38271 + Fib_succ_major
CAZyme k141_92532 k141_92532_23 38291 39994 + GH136
pfam k141_92532 k141_92532_24 40007 42154 + Fib_succ_major | SusE | SusE | SusE
pfam k141_92532 k141_92532_25 42203 43396 + Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_92532 k141_92532_26 43410 44987 + GH20
CAZyme k141_92532 k141_92532_27 45246 46067 - GT2
CAZyme k141_92532 k141_92532_28 46100 47218 - GT4
CAZyme k141_92532 k141_92532_29 47206 48309 - GT4
Gene ID: k141_92532_17
Type: CAZyme
Location: 27544 - 29391 (+)
Gene ID: k141_92532_18
Type: CAZyme
Location: 29402 - 31264 (+)
Gene ID: k141_92532_19
Type: CAZyme
Location: 31273 - 32385 (+)
Gene ID: k141_92532_20
Type: TC
Location: 32446 - 35523 (+)
Gene ID: k141_92532_21
Type: TC
Location: 35527 - 37134 (+)
Gene ID: k141_92532_22
Type: pfam
Location: 37153 - 38271 (+)
Gene ID: k141_92532_23
Type: CAZyme
Location: 38291 - 39994 (+)
Gene ID: k141_92532_24
Type: pfam
Location: 40007 - 42154 (+)
Gene ID: k141_92532_25
Type: pfam
Location: 42203 - 43396 (+)
Gene ID: k141_92532_26
Type: CAZyme
Location: 43410 - 44987 (+)
Gene ID: k141_92532_27
Type: CAZyme
Location: 45246 - 46067 (-)
Gene ID: k141_92532_28
Type: CAZyme
Location: 46100 - 47218 (-)
Gene ID: k141_92532_29
Type: CAZyme
Location: 47206 - 48309 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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