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Cluster: CGMR025896_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_54761 k141_54761_8 7446 9035 + 2.A.21.3.19
CAZyme k141_54761 k141_54761_9 9289 12144 + GH2
CAZyme k141_54761 k141_54761_10 12200 13411 - GH88
TC k141_54761 k141_54761_11 13782 16880 + 1.B.14.6.1
pfam k141_54761 k141_54761_12 16901 18907 + SusD_RagB | SusD-like_3
TC k141_54761 k141_54761_13 18940 21807 + 1.B.14.6.1
pfam k141_54761 k141_54761_14 21838 23613 + SusD_RagB | SusD-like_3
CAZyme k141_54761 k141_54761_15 23682 25994 + PL35
CAZyme k141_54761 k141_54761_16 26002 28644 + GH3
Gene ID: k141_54761_8
Type: TC
Location: 7446 - 9035 (+)
Gene ID: k141_54761_9
Type: CAZyme
Location: 9289 - 12144 (+)
Gene ID: k141_54761_10
Type: CAZyme
Location: 12200 - 13411 (-)
Gene ID: k141_54761_11
Type: TC
Location: 13782 - 16880 (+)
Gene ID: k141_54761_12
Type: pfam
Location: 16901 - 18907 (+)
Gene ID: k141_54761_13
Type: TC
Location: 18940 - 21807 (+)
Gene ID: k141_54761_14
Type: pfam
Location: 21838 - 23613 (+)
Gene ID: k141_54761_15
Type: CAZyme
Location: 23682 - 25994 (+)
Gene ID: k141_54761_16
Type: CAZyme
Location: 26002 - 28644 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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