Cluster: CGMR025896_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR025896
- CGC Family ID: CGCFAM_01287
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_114434 | k141_114434_2 | 891 | 4067 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_114434 | k141_114434_3 | 4268 | 6163 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_114434 | k141_114434_4 | 6227 | 8479 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_114434 | k141_114434_5 | 9223 | 10530 | + | GH29 |
| pfam | k141_114434 | k141_114434_6 | 10548 | 13145 | + | Transglut_core |
| TC | k141_114434 | k141_114434_7 | 13155 | 13373 | + | 9.B.158.1.2 |
Gene ID: k141_114434_2
Type: TC
Location: 891 - 4067 (-)
Type: TC
Location: 891 - 4067 (-)
Gene ID: k141_114434_3
Type:
Location: 4268 - 6163 (-)
Type:
Location: 4268 - 6163 (-)
Gene ID: k141_114434_4
Type:
Location: 6227 - 8479 (-)
Type:
Location: 6227 - 8479 (-)
Gene ID: k141_114434_5
Type: CAZyme
Location: 9223 - 10530 (+)
Type: CAZyme
Location: 9223 - 10530 (+)
Gene ID: k141_114434_6
Type: pfam
Location: 10548 - 13145 (+)
Type: pfam
Location: 10548 - 13145 (+)
Gene ID: k141_114434_7
Type: TC
Location: 13155 - 13373 (+)
Type: TC
Location: 13155 - 13373 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp001941065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.