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Cluster: CGMR025896_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_38009 k141_38009_6 6188 7822 - 8.A.46.1.3
TC k141_38009 k141_38009_7 7835 11023 - 1.B.14.6.1
CAZyme k141_38009 k141_38009_8 11279 12913 - GH20
sulfatase k141_38009 k141_38009_9 12918 13739 - S1_7
pfam k141_38009 k141_38009_10 13736 14752 - Metallophos
CAZyme k141_38009 k141_38009_11 14768 16378 - GH63
pfam k141_38009 k141_38009_12 16385 18316 - Alk_phosphatase
pfam k141_38009 k141_38009_13 18330 19169 - Exo_endo_phos
CAZyme k141_38009 k141_38009_14 19177 22059 - GH92
TF k141_38009 k141_38009_15 22269 23453 + HTH_AraC
CAZyme k141_38009 k141_38009_16 23553 24971 + GH125
Gene ID: k141_38009_6
Type: TC
Location: 6188 - 7822 (-)
Gene ID: k141_38009_7
Type: TC
Location: 7835 - 11023 (-)
Gene ID: k141_38009_8
Type: CAZyme
Location: 11279 - 12913 (-)
Gene ID: k141_38009_9
Type: sulfatase
Location: 12918 - 13739 (-)
Gene ID: k141_38009_10
Type: pfam
Location: 13736 - 14752 (-)
Gene ID: k141_38009_11
Type: CAZyme
Location: 14768 - 16378 (-)
Gene ID: k141_38009_12
Type: pfam
Location: 16385 - 18316 (-)
Gene ID: k141_38009_13
Type: pfam
Location: 18330 - 19169 (-)
Gene ID: k141_38009_14
Type: CAZyme
Location: 19177 - 22059 (-)
Gene ID: k141_38009_15
Type: TF
Location: 22269 - 23453 (+)
Gene ID: k141_38009_16
Type: CAZyme
Location: 23553 - 24971 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_38009_6 vegan > omnivore 1.02601 0.00364

🧭 Explore Read Mapping of CGC

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