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Cluster: CGMR025896_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_98129 k141_98129_1 1 1254 - 2.A.1.53.5
TF k141_98129 k141_98129_2 1412 2032 + GerE
STP k141_98129 k141_98129_3 2153 3148 + FecR
TC k141_98129 k141_98129_4 3230 6466 + 1.B.14.6.1
TC k141_98129 k141_98129_5 6493 7971 + 8.A.46.1.3
NULL(UNKNOWN) k141_98129 k141_98129_6 7990 9717 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_98129 k141_98129_7 9742 11460 + GH123
CAZyme k141_98129 k141_98129_8 11477 13549 + GH20
sulfatase k141_98129 k141_98129_9 13563 15065 + S1_15
CAZyme k141_98129 k141_98129_10 15112 17850 + CBM67 | GH78
Gene ID: k141_98129_1
Type: TC
Location: 1 - 1254 (-)
Gene ID: k141_98129_2
Type: TF
Location: 1412 - 2032 (+)
Gene ID: k141_98129_3
Type: STP
Location: 2153 - 3148 (+)
Gene ID: k141_98129_4
Type: TC
Location: 3230 - 6466 (+)
Gene ID: k141_98129_5
Type: TC
Location: 6493 - 7971 (+)
Gene ID: k141_98129_6
Type:
Location: 7990 - 9717 (+)
Gene ID: k141_98129_7
Type: CAZyme
Location: 9742 - 11460 (+)
Gene ID: k141_98129_8
Type: CAZyme
Location: 11477 - 13549 (+)
Gene ID: k141_98129_9
Type: sulfatase
Location: 13563 - 15065 (+)
Gene ID: k141_98129_10
Type: CAZyme
Location: 15112 - 17850 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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