Cluster: CGMR025896_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR025896
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_24451 | k141_24451_35 | 40440 | 42395 | + | GH20 |
| TF | k141_24451 | k141_24451_36 | 42382 | 43581 | - | 0040266 |
| pfam | k141_24451 | k141_24451_37 | 43838 | 44878 | + | DUF4434 |
| TC | k141_24451 | k141_24451_38 | 44882 | 46267 | + | 2.A.1.1.55 |
| pfam | k141_24451 | k141_24451_39 | 46279 | 48117 | + | FAD_binding_2 | FAD_oxidored |
| CAZyme | k141_24451 | k141_24451_40 | 48122 | 49516 | + | GH109 |
| TC | k141_24451 | k141_24451_41 | 49550 | 51208 | - | 2.A.1.42.2 |
Gene ID: k141_24451_35
Type: CAZyme
Location: 40440 - 42395 (+)
Type: CAZyme
Location: 40440 - 42395 (+)
Gene ID: k141_24451_36
Type: TF
Location: 42382 - 43581 (-)
Type: TF
Location: 42382 - 43581 (-)
Gene ID: k141_24451_37
Type: pfam
Location: 43838 - 44878 (+)
Type: pfam
Location: 43838 - 44878 (+)
Gene ID: k141_24451_38
Type: TC
Location: 44882 - 46267 (+)
Type: TC
Location: 44882 - 46267 (+)
Gene ID: k141_24451_39
Type: pfam
Location: 46279 - 48117 (+)
Type: pfam
Location: 46279 - 48117 (+)
Gene ID: k141_24451_40
Type: CAZyme
Location: 48122 - 49516 (+)
Type: CAZyme
Location: 48122 - 49516 (+)
Gene ID: k141_24451_41
Type: TC
Location: 49550 - 51208 (-)
Type: TC
Location: 49550 - 51208 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp001941065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.