Cluster: CGMR025896_CGC25
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR025896
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_78457 | k141_78457_51 | 65665 | 67521 | + | 8.A.46.1.3 |
| NULL(UNKNOWN) | k141_78457 | k141_78457_52 | 67547 | 69253 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_78457 | k141_78457_53 | 69307 | 70764 | + | PL9 |
| CAZyme | k141_78457 | k141_78457_54 | 70773 | 72140 | + | GH105 |
| CAZyme | k141_78457 | k141_78457_55 | 72153 | 74174 | + | GH97 |
| CAZyme | k141_78457 | k141_78457_56 | 74162 | 77140 | + | GH2 |
| CAZyme | k141_78457 | k141_78457_57 | 77153 | 78484 | + | PL1_2 |
| pfam | k141_78457 | k141_78457_58 | 78589 | 79155 | + | Acetyltransf_1 | Acetyltransf_7 |
| TC | k141_78457 | k141_78457_59 | 79164 | 80234 | - | 2.A.98.1.3 |
Gene ID: k141_78457_51
Type: TC
Location: 65665 - 67521 (+)
Type: TC
Location: 65665 - 67521 (+)
Gene ID: k141_78457_52
Type:
Location: 67547 - 69253 (+)
Type:
Location: 67547 - 69253 (+)
Gene ID: k141_78457_53
Type: CAZyme
Location: 69307 - 70764 (+)
Type: CAZyme
Location: 69307 - 70764 (+)
Gene ID: k141_78457_54
Type: CAZyme
Location: 70773 - 72140 (+)
Type: CAZyme
Location: 70773 - 72140 (+)
Gene ID: k141_78457_55
Type: CAZyme
Location: 72153 - 74174 (+)
Type: CAZyme
Location: 72153 - 74174 (+)
Gene ID: k141_78457_56
Type: CAZyme
Location: 74162 - 77140 (+)
Type: CAZyme
Location: 74162 - 77140 (+)
Gene ID: k141_78457_57
Type: CAZyme
Location: 77153 - 78484 (+)
Type: CAZyme
Location: 77153 - 78484 (+)
Gene ID: k141_78457_58
Type: pfam
Location: 78589 - 79155 (+)
Type: pfam
Location: 78589 - 79155 (+)
Gene ID: k141_78457_59
Type: TC
Location: 79164 - 80234 (-)
Type: TC
Location: 79164 - 80234 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp001941065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_78457_51 | vegetarian > omnivore | 1.08706 | 0.01949 |
| k141_78457_51 | vegetarian > vegan | 2.54367 | 0.01598 |
| k141_78457_52 | vegetarian > vegan | 1.43577 | 0.01598 |
| k141_78457_53 | vegetarian > omnivore | 1.41910 | 0.01949 |
| k141_78457_53 | vegetarian > vegan | 1.56955 | 0.01598 |
| k141_78457_54 | vegetarian > omnivore | 1.48390 | 0.01949 |
| k141_78457_54 | vegetarian > vegan | 2.16224 | 0.01598 |
| k141_78457_55 | vegetarian > vegan | 1.98797 | 0.00665 |
| k141_78457_56 | vegetarian > vegan | 1.65639 | 0.01598 |
| k141_78457_57 | vegetarian > omnivore | 1.12629 | 0.01949 |
| k141_78457_57 | vegetarian > vegan | 1.62371 | 0.01598 |