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Cluster: CGMR025896_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_134877 k141_134877_18 28599 30116 + GH50
TC k141_134877 k141_134877_19 30159 33380 + 1.B.14.6.1
pfam k141_134877 k141_134877_20 33400 35094 + SusD_RagB | SusD-like_2 | SusD-like_3
NULL(UNKNOWN) k141_134877 k141_134877_21 35096 36049 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_134877 k141_134877_22 36046 38820 + GH3
CAZyme k141_134877 k141_134877_23 38834 41041 + GH89
CAZyme k141_134877 k141_134877_24 41038 42534 + GH50
CAZyme k141_134877 k141_134877_25 42709 44388 - GH13_44
Gene ID: k141_134877_18
Type: CAZyme
Location: 28599 - 30116 (+)
Gene ID: k141_134877_19
Type: TC
Location: 30159 - 33380 (+)
Gene ID: k141_134877_20
Type: pfam
Location: 33400 - 35094 (+)
Gene ID: k141_134877_21
Type:
Location: 35096 - 36049 (+)
Gene ID: k141_134877_22
Type: CAZyme
Location: 36046 - 38820 (+)
Gene ID: k141_134877_23
Type: CAZyme
Location: 38834 - 41041 (+)
Gene ID: k141_134877_24
Type: CAZyme
Location: 41038 - 42534 (+)
Gene ID: k141_134877_25
Type: CAZyme
Location: 42709 - 44388 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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