Cluster: CGMR025896_CGC21
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR025896
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_46194 | k141_46194_2 | 1619 | 3043 | + | CE20 |
| NULL(UNKNOWN) | k141_46194 | k141_46194_3 | 3040 | 3162 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_46194 | k141_46194_4 | 3185 | 5116 | + | GH97 |
| pfam | k141_46194 | k141_46194_5 | 5269 | 6705 | + | Big_2 | Big_2 | Big-like |
| TC | k141_46194 | k141_46194_6 | 6815 | 9934 | + | 1.B.14.6.1 |
| TC | k141_46194 | k141_46194_7 | 9947 | 11638 | + | 8.A.46.1.6 |
| CAZyme | k141_46194 | k141_46194_8 | 11691 | 13358 | + | GH110 |
| CAZyme | k141_46194 | k141_46194_9 | 13362 | 15149 | + | GH110 |
Gene ID: k141_46194_2
Type: CAZyme
Location: 1619 - 3043 (+)
Type: CAZyme
Location: 1619 - 3043 (+)
Gene ID: k141_46194_3
Type:
Location: 3040 - 3162 (+)
Type:
Location: 3040 - 3162 (+)
Gene ID: k141_46194_4
Type: CAZyme
Location: 3185 - 5116 (+)
Type: CAZyme
Location: 3185 - 5116 (+)
Gene ID: k141_46194_5
Type: pfam
Location: 5269 - 6705 (+)
Type: pfam
Location: 5269 - 6705 (+)
Gene ID: k141_46194_6
Type: TC
Location: 6815 - 9934 (+)
Type: TC
Location: 6815 - 9934 (+)
Gene ID: k141_46194_7
Type: TC
Location: 9947 - 11638 (+)
Type: TC
Location: 9947 - 11638 (+)
Gene ID: k141_46194_8
Type: CAZyme
Location: 11691 - 13358 (+)
Type: CAZyme
Location: 11691 - 13358 (+)
Gene ID: k141_46194_9
Type: CAZyme
Location: 13362 - 15149 (+)
Type: CAZyme
Location: 13362 - 15149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp001941065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_46194_5 | vegan > omnivore | 2.25240 | 0.00364 |
| k141_46194_5 | vegetarian > omnivore | 1.97577 | 0.01949 |
| k141_46194_6 | vegan > omnivore | 2.05850 | 0.00364 |
| k141_46194_6 | vegetarian > omnivore | 1.77012 | 0.01949 |
| k141_46194_7 | vegan > omnivore | 2.21773 | 0.00364 |
| k141_46194_7 | vegetarian > omnivore | 2.10693 | 0.01949 |
| k141_46194_8 | vegan > omnivore | 2.40965 | 0.00364 |
| k141_46194_8 | vegetarian > omnivore | 2.43885 | 0.01949 |
| k141_46194_9 | vegan > omnivore | 2.26622 | 0.00364 |
| k141_46194_9 | vegetarian > omnivore | 2.08231 | 0.01949 |