Cluster: CGMR025896_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR025896
- CGC Family ID: CGCFAM_01681
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_95588 | k141_95588_28 | 47101 | 50241 | - | 2.A.6.3.6 |
| TC | k141_95588 | k141_95588_29 | 50257 | 51267 | - | 2.A.6.3.7 |
| TC | k141_95588 | k141_95588_30 | 51291 | 52610 | - | 1.B.17.2.10 |
| STP | k141_95588 | k141_95588_31 | 52685 | 53320 | - | TetR_N |
| STP | k141_95588 | k141_95588_32 | 53465 | 55504 | - | HATPase_c | HisKA |
| TC | k141_95588 | k141_95588_33 | 55631 | 57178 | - | 2.A.17.1.7 |
| CAZyme | k141_95588 | k141_95588_34 | 57467 | 59503 | + | GH13_8 |
Gene ID: k141_95588_28
Type: TC
Location: 47101 - 50241 (-)
Type: TC
Location: 47101 - 50241 (-)
Gene ID: k141_95588_29
Type: TC
Location: 50257 - 51267 (-)
Type: TC
Location: 50257 - 51267 (-)
Gene ID: k141_95588_30
Type: TC
Location: 51291 - 52610 (-)
Type: TC
Location: 51291 - 52610 (-)
Gene ID: k141_95588_31
Type: STP
Location: 52685 - 53320 (-)
Type: STP
Location: 52685 - 53320 (-)
Gene ID: k141_95588_32
Type: STP
Location: 53465 - 55504 (-)
Type: STP
Location: 53465 - 55504 (-)
Gene ID: k141_95588_33
Type: TC
Location: 55631 - 57178 (-)
Type: TC
Location: 55631 - 57178 (-)
Gene ID: k141_95588_34
Type: CAZyme
Location: 57467 - 59503 (+)
Type: CAZyme
Location: 57467 - 59503 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp001941065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.