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Cluster: CGMR025896_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_95588 k141_95588_14 22201 24138 + PL12_2
CAZyme k141_95588 k141_95588_15 24144 26147 + PL12_2
CAZyme k141_95588 k141_95588_16 26155 27300 + PL13
CAZyme k141_95588 k141_95588_17 27359 29794 - GH95
CAZyme k141_95588 k141_95588_18 29791 32676 - PL8_2
TC k141_95588 k141_95588_19 32737 34443 - 8.A.46.1.3
TC k141_95588 k141_95588_20 34477 37623 - 1.B.14.6.1
pfam k141_95588 k141_95588_21 37644 39824 - SGBP_BT4661-like
CAZyme k141_95588 k141_95588_22 39830 41995 - PL12_2
CAZyme k141_95588 k141_95588_23 42095 43291 - GH88
Gene ID: k141_95588_14
Type: CAZyme
Location: 22201 - 24138 (+)
Gene ID: k141_95588_15
Type: CAZyme
Location: 24144 - 26147 (+)
Gene ID: k141_95588_16
Type: CAZyme
Location: 26155 - 27300 (+)
Gene ID: k141_95588_17
Type: CAZyme
Location: 27359 - 29794 (-)
Gene ID: k141_95588_18
Type: CAZyme
Location: 29791 - 32676 (-)
Gene ID: k141_95588_19
Type: TC
Location: 32737 - 34443 (-)
Gene ID: k141_95588_20
Type: TC
Location: 34477 - 37623 (-)
Gene ID: k141_95588_21
Type: pfam
Location: 37644 - 39824 (-)
Gene ID: k141_95588_22
Type: CAZyme
Location: 39830 - 41995 (-)
Gene ID: k141_95588_23
Type: CAZyme
Location: 42095 - 43291 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_95588_14 vegan > omnivore 1.04738 0.00364

🧭 Explore Read Mapping of CGC

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