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Cluster: CGMR025896_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_38070 k141_38070_40 43174 46512 + 1.B.14.6.1
TC k141_38070 k141_38070_41 46524 48416 + 8.A.46.1.6
CAZyme k141_38070 k141_38070_42 48477 50198 + CBM32 | GH43_28
CAZyme k141_38070 k141_38070_43 50200 51549 + GH144
CAZyme k141_38070 k141_38070_44 51569 52945 + GH144
CAZyme k141_38070 k141_38070_45 52965 55205 + GH3
NULL(UNKNOWN) k141_38070 k141_38070_46 55207 56868 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_38070 k141_38070_47 56921 59578 + CBM57 | GH2
TF k141_38070 k141_38070_48 59593 60129 + GerE
CAZyme k141_38070 k141_38070_49 60170 62758 - GH2
TF k141_38070 k141_38070_50 63197 63751 + GerE
STP k141_38070 k141_38070_51 63819 65009 + FecR
TC k141_38070 k141_38070_52 65083 68754 + 1.B.14.6.1
Gene ID: k141_38070_40
Type: TC
Location: 43174 - 46512 (+)
Gene ID: k141_38070_41
Type: TC
Location: 46524 - 48416 (+)
Gene ID: k141_38070_42
Type: CAZyme
Location: 48477 - 50198 (+)
Gene ID: k141_38070_43
Type: CAZyme
Location: 50200 - 51549 (+)
Gene ID: k141_38070_44
Type: CAZyme
Location: 51569 - 52945 (+)
Gene ID: k141_38070_45
Type: CAZyme
Location: 52965 - 55205 (+)
Gene ID: k141_38070_46
Type:
Location: 55207 - 56868 (+)
Gene ID: k141_38070_47
Type: CAZyme
Location: 56921 - 59578 (+)
Gene ID: k141_38070_48
Type: TF
Location: 59593 - 60129 (+)
Gene ID: k141_38070_49
Type: CAZyme
Location: 60170 - 62758 (-)
Gene ID: k141_38070_50
Type: TF
Location: 63197 - 63751 (+)
Gene ID: k141_38070_51
Type: STP
Location: 63819 - 65009 (+)
Gene ID: k141_38070_52
Type: TC
Location: 65083 - 68754 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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