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Cluster: CGMR025896_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_132480 k141_132480_31 38722 39441 + GT2
pfam k141_132480 k141_132480_32 39448 40668 + GT87
pfam k141_132480 k141_132480_33 40665 41033 - GtrA_DPMS_TM
CAZyme k141_132480 k141_132480_34 41030 42745 - GT83
STP k141_132480 k141_132480_35 42960 43583 + TetR_N
pfam k141_132480 k141_132480_36 43587 44867 + OEP | OEP
TC k141_132480 k141_132480_37 44881 45768 + 3.A.1.105.4
TC k141_132480 k141_132480_38 45780 46700 + 3.A.1.105.4
TC k141_132480 k141_132480_39 46690 47433 + 3.A.1.105.4
TC k141_132480 k141_132480_40 47436 48530 + 3.A.1.105.15
TC k141_132480 k141_132480_41 48533 49636 + 3.A.1.105.4
STP k141_132480 k141_132480_42 49674 50252 + TetR_N
TC k141_132480 k141_132480_43 50276 50806 - 9.B.158.1.2
Gene ID: k141_132480_31
Type: CAZyme
Location: 38722 - 39441 (+)
Gene ID: k141_132480_32
Type: pfam
Location: 39448 - 40668 (+)
Gene ID: k141_132480_33
Type: pfam
Location: 40665 - 41033 (-)
Gene ID: k141_132480_34
Type: CAZyme
Location: 41030 - 42745 (-)
Gene ID: k141_132480_35
Type: STP
Location: 42960 - 43583 (+)
Gene ID: k141_132480_36
Type: pfam
Location: 43587 - 44867 (+)
Gene ID: k141_132480_37
Type: TC
Location: 44881 - 45768 (+)
Gene ID: k141_132480_38
Type: TC
Location: 45780 - 46700 (+)
Gene ID: k141_132480_39
Type: TC
Location: 46690 - 47433 (+)
Gene ID: k141_132480_40
Type: TC
Location: 47436 - 48530 (+)
Gene ID: k141_132480_41
Type: TC
Location: 48533 - 49636 (+)
Gene ID: k141_132480_42
Type: STP
Location: 49674 - 50252 (+)
Gene ID: k141_132480_43
Type: TC
Location: 50276 - 50806 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_132480_37 vegetarian > omnivore 1.11367 0.01949
k141_132480_41 vegetarian > omnivore 1.45715 0.01949

🧭 Explore Read Mapping of CGC

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