dbCAN Logo

Cluster: CGMR025896_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_47574 k141_47574_3 2542 3219 + 1.A.8.13.3
pfam k141_47574 k141_47574_4 3274 4188 - EamA | EamA
TC k141_47574 k141_47574_5 4288 5970 - 8.A.46.1.3
TC k141_47574 k141_47574_6 5982 9215 - 1.B.14.6.1
CAZyme k141_47574 k141_47574_7 9243 11987 - GH115
NULL(UNKNOWN) k141_47574 k141_47574_8 11996 13195 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_47574 k141_47574_9 13338 15752 - GH2
CAZyme k141_47574 k141_47574_10 15749 17680 - PL34
CAZyme k141_47574 k141_47574_11 17777 19075 - CE7
CAZyme k141_47574 k141_47574_12 19087 20310 - GH105
TF k141_47574 k141_47574_13 20480 24562 + HTH_AraC
CAZyme k141_47574 k141_47574_14 24636 27128 + GH36
Gene ID: k141_47574_3
Type: TC
Location: 2542 - 3219 (+)
Gene ID: k141_47574_4
Type: pfam
Location: 3274 - 4188 (-)
Gene ID: k141_47574_5
Type: TC
Location: 4288 - 5970 (-)
Gene ID: k141_47574_6
Type: TC
Location: 5982 - 9215 (-)
Gene ID: k141_47574_7
Type: CAZyme
Location: 9243 - 11987 (-)
Gene ID: k141_47574_8
Type:
Location: 11996 - 13195 (-)
Gene ID: k141_47574_9
Type: CAZyme
Location: 13338 - 15752 (-)
Gene ID: k141_47574_10
Type: CAZyme
Location: 15749 - 17680 (-)
Gene ID: k141_47574_11
Type: CAZyme
Location: 17777 - 19075 (-)
Gene ID: k141_47574_12
Type: CAZyme
Location: 19087 - 20310 (-)
Gene ID: k141_47574_13
Type: TF
Location: 20480 - 24562 (+)
Gene ID: k141_47574_14
Type: CAZyme
Location: 24636 - 27128 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_47574_3 vegetarian > vegan 1.04124 0.01598

🧭 Explore Read Mapping of CGC

← Back to Cluster List