Cluster: CGMR023366_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023366
- CGC Family ID: CGCFAM_00617
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_73487 | k141_73487_38 | 47489 | 48700 | - | 3.B.1.1.5 |
| pfam | k141_73487 | k141_73487_39 | 48705 | 49166 | - | Biotin_lipoyl |
| NULL(UNKNOWN) | k141_73487 | k141_73487_40 | 49180 | 49515 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_73487 | k141_73487_41 | 49529 | 51091 | - | 3.B.1.1.2 |
| STP | k141_73487 | k141_73487_42 | 51096 | 51506 | - | Glyoxalase |
| NULL(UNKNOWN) | k141_73487 | k141_73487_43 | 52134 | 52415 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_73487 | k141_73487_44 | 52400 | 53389 | - | GT4 |
Gene ID: k141_73487_38
Type: TC
Location: 47489 - 48700 (-)
Type: TC
Location: 47489 - 48700 (-)
Gene ID: k141_73487_39
Type: pfam
Location: 48705 - 49166 (-)
Type: pfam
Location: 48705 - 49166 (-)
Gene ID: k141_73487_40
Type:
Location: 49180 - 49515 (-)
Type:
Location: 49180 - 49515 (-)
Gene ID: k141_73487_41
Type: TC
Location: 49529 - 51091 (-)
Type: TC
Location: 49529 - 51091 (-)
Gene ID: k141_73487_42
Type: STP
Location: 51096 - 51506 (-)
Type: STP
Location: 51096 - 51506 (-)
Gene ID: k141_73487_43
Type:
Location: 52134 - 52415 (+)
Type:
Location: 52134 - 52415 (+)
Gene ID: k141_73487_44
Type: CAZyme
Location: 52400 - 53389 (-)
Type: CAZyme
Location: 52400 - 53389 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.