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Cluster: CGMR023366_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29350 k141_29350_18 15238 17838 + GH77
TF k141_29350 k141_29350_19 18217 18969 - LytTR
TC k141_29350 k141_29350_20 18971 20350 - 8.A.59.2.1
TC k141_29350 k141_29350_21 20570 21880 + 2.A.2.6.2
TC k141_29350 k141_29350_22 21942 24965 + 1.B.14.6.1
TC k141_29350 k141_29350_23 24979 26637 + 8.A.46.1.1
pfam k141_29350 k141_29350_24 26661 28475 + SusE | SusF_SusE
CAZyme k141_29350 k141_29350_25 28581 30899 + GH13_36
CAZyme k141_29350 k141_29350_26 30910 32247 + GH13
CAZyme k141_29350 k141_29350_27 32445 34322 + GH13_46
CAZyme k141_29350 k141_29350_28 34335 36530 + GH97
Gene ID: k141_29350_18
Type: CAZyme
Location: 15238 - 17838 (+)
Gene ID: k141_29350_19
Type: TF
Location: 18217 - 18969 (-)
Gene ID: k141_29350_20
Type: TC
Location: 18971 - 20350 (-)
Gene ID: k141_29350_21
Type: TC
Location: 20570 - 21880 (+)
Gene ID: k141_29350_22
Type: TC
Location: 21942 - 24965 (+)
Gene ID: k141_29350_23
Type: TC
Location: 24979 - 26637 (+)
Gene ID: k141_29350_24
Type: pfam
Location: 26661 - 28475 (+)
Gene ID: k141_29350_25
Type: CAZyme
Location: 28581 - 30899 (+)
Gene ID: k141_29350_26
Type: CAZyme
Location: 30910 - 32247 (+)
Gene ID: k141_29350_27
Type: CAZyme
Location: 32445 - 34322 (+)
Gene ID: k141_29350_28
Type: CAZyme
Location: 34335 - 36530 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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