Cluster: CGMR023366_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023366
- CGC Family ID: CGCFAM_00511
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5393 | k141_5393_127 | 128078 | 129409 | + | 3.A.5.1.1 |
| pfam | k141_5393 | k141_5393_128 | 129896 | 130777 | + | GTP_EFTU | Ras | MMR_HSR1 | FeoB_N | KH_2 | PduV-EutP |
| STP | k141_5393 | k141_5393_129 | 130824 | 132812 | + | TPR_1 | TPR_1 | TPR_1 | TPR_1 | TPR_1 | TPR_1 |
| TC | k141_5393 | k141_5393_130 | 132829 | 134217 | + | 2.A.1.53.5 |
| CAZyme | k141_5393 | k141_5393_131 | 134285 | 135430 | - | GT4 |
Gene ID: k141_5393_127
Type: TC
Location: 128078 - 129409 (+)
Type: TC
Location: 128078 - 129409 (+)
Gene ID: k141_5393_128
Type: pfam
Location: 129896 - 130777 (+)
Type: pfam
Location: 129896 - 130777 (+)
Gene ID: k141_5393_129
Type: STP
Location: 130824 - 132812 (+)
Type: STP
Location: 130824 - 132812 (+)
Gene ID: k141_5393_130
Type: TC
Location: 132829 - 134217 (+)
Type: TC
Location: 132829 - 134217 (+)
Gene ID: k141_5393_131
Type: CAZyme
Location: 134285 - 135430 (-)
Type: CAZyme
Location: 134285 - 135430 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.