Cluster: CGMR023366_CGC37
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR023366
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_103893 | k141_103893_113 | 145197 | 146690 | - | GH50 |
| CAZyme | k141_103893 | k141_103893_114 | 146687 | 148867 | - | GH89 |
| CAZyme | k141_103893 | k141_103893_115 | 148898 | 151675 | - | GH3 |
| NULL(UNKNOWN) | k141_103893 | k141_103893_116 | 151672 | 152637 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_103893 | k141_103893_117 | 152627 | 154297 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | k141_103893 | k141_103893_118 | 154317 | 157538 | - | 1.B.14.6.1 |
| CAZyme | k141_103893 | k141_103893_119 | 157583 | 159100 | - | GH50 |
Gene ID: k141_103893_113
Type: CAZyme
Location: 145197 - 146690 (-)
Type: CAZyme
Location: 145197 - 146690 (-)
Gene ID: k141_103893_114
Type: CAZyme
Location: 146687 - 148867 (-)
Type: CAZyme
Location: 146687 - 148867 (-)
Gene ID: k141_103893_115
Type: CAZyme
Location: 148898 - 151675 (-)
Type: CAZyme
Location: 148898 - 151675 (-)
Gene ID: k141_103893_116
Type:
Location: 151672 - 152637 (-)
Type:
Location: 151672 - 152637 (-)
Gene ID: k141_103893_117
Type: pfam
Location: 152627 - 154297 (-)
Type: pfam
Location: 152627 - 154297 (-)
Gene ID: k141_103893_118
Type: TC
Location: 154317 - 157538 (-)
Type: TC
Location: 154317 - 157538 (-)
Gene ID: k141_103893_119
Type: CAZyme
Location: 157583 - 159100 (-)
Type: CAZyme
Location: 157583 - 159100 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.