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Cluster: CGMR023366_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_103893 k141_103893_90 97161 99353 + PL35
TF k141_103893 k141_103893_91 99554 103615 + HTH_AraC
CAZyme k141_103893 k141_103893_92 103725 104906 + GH88
CAZyme k141_103893 k141_103893_93 104910 106337 + PL42
CAZyme k141_103893 k141_103893_94 106376 108379 + PL42
CAZyme k141_103893 k141_103893_95 108401 109495 + GH105
pfam k141_103893 k141_103893_96 109608 111197 + BACON | BACON | BACON | BACON_2 | BACON_2 | BACON_2
TC k141_103893 k141_103893_97 111294 114482 + 1.B.14.6.1
pfam k141_103893 k141_103893_98 114496 116361 + SusD_RagB | SusD-like_3
TC k141_103893 k141_103893_99 116385 119276 + 1.B.14.6.1
Gene ID: k141_103893_90
Type: CAZyme
Location: 97161 - 99353 (+)
Gene ID: k141_103893_91
Type: TF
Location: 99554 - 103615 (+)
Gene ID: k141_103893_92
Type: CAZyme
Location: 103725 - 104906 (+)
Gene ID: k141_103893_93
Type: CAZyme
Location: 104910 - 106337 (+)
Gene ID: k141_103893_94
Type: CAZyme
Location: 106376 - 108379 (+)
Gene ID: k141_103893_95
Type: CAZyme
Location: 108401 - 109495 (+)
Gene ID: k141_103893_96
Type: pfam
Location: 109608 - 111197 (+)
Gene ID: k141_103893_97
Type: TC
Location: 111294 - 114482 (+)
Gene ID: k141_103893_98
Type: pfam
Location: 114496 - 116361 (+)
Gene ID: k141_103893_99
Type: TC
Location: 116385 - 119276 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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