Cluster: CGMR023366_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR023366
- CGC Family ID: CGCFAM_03728
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_28153 | k141_28153_29 | 34112 | 35287 | + | 2.A.1.7.16 |
| sulfatase | k141_28153 | k141_28153_30 | 35271 | 36380 | + | S1_7 |
| TC | k141_28153 | k141_28153_31 | 36410 | 39475 | + | 1.B.14.6.1 |
| TC | k141_28153 | k141_28153_32 | 39502 | 41043 | + | 8.A.46.1.3 |
| CAZyme | k141_28153 | k141_28153_33 | 41062 | 43782 | + | GH92 |
| NULL(UNKNOWN) | k141_28153 | k141_28153_34 | 43804 | 44268 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_28153 | k141_28153_35 | 44280 | 45248 | + | DUF4961 |
| CAZyme | k141_28153 | k141_28153_36 | 45253 | 46683 | + | CE20 |
Gene ID: k141_28153_29
Type: TC
Location: 34112 - 35287 (+)
Type: TC
Location: 34112 - 35287 (+)
Gene ID: k141_28153_30
Type: sulfatase
Location: 35271 - 36380 (+)
Type: sulfatase
Location: 35271 - 36380 (+)
Gene ID: k141_28153_31
Type: TC
Location: 36410 - 39475 (+)
Type: TC
Location: 36410 - 39475 (+)
Gene ID: k141_28153_32
Type: TC
Location: 39502 - 41043 (+)
Type: TC
Location: 39502 - 41043 (+)
Gene ID: k141_28153_33
Type: CAZyme
Location: 41062 - 43782 (+)
Type: CAZyme
Location: 41062 - 43782 (+)
Gene ID: k141_28153_34
Type:
Location: 43804 - 44268 (+)
Type:
Location: 43804 - 44268 (+)
Gene ID: k141_28153_35
Type: pfam
Location: 44280 - 45248 (+)
Type: pfam
Location: 44280 - 45248 (+)
Gene ID: k141_28153_36
Type: CAZyme
Location: 45253 - 46683 (+)
Type: CAZyme
Location: 45253 - 46683 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.