Cluster: CGMR023366_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR023366
- CGC Family ID: CGCFAM_05400
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_84340 | k141_84340_33 | 35811 | 37217 | + | CE20 |
| CAZyme | k141_84340 | k141_84340_34 | 37242 | 38663 | + | CE20 |
| pfam | k141_84340 | k141_84340_35 | 38721 | 39026 | - | Acetyltransf_CG |
| STP | k141_84340 | k141_84340_36 | 39083 | 40132 | + | HhH-GPD |
| TC | k141_84340 | k141_84340_37 | 40108 | 41061 | - | 2.A.19.5.2 |
| TC | k141_84340 | k141_84340_38 | 41106 | 41909 | - | 2.A.5.5.5 |
Gene ID: k141_84340_33
Type: CAZyme
Location: 35811 - 37217 (+)
Type: CAZyme
Location: 35811 - 37217 (+)
Gene ID: k141_84340_34
Type: CAZyme
Location: 37242 - 38663 (+)
Type: CAZyme
Location: 37242 - 38663 (+)
Gene ID: k141_84340_35
Type: pfam
Location: 38721 - 39026 (-)
Type: pfam
Location: 38721 - 39026 (-)
Gene ID: k141_84340_36
Type: STP
Location: 39083 - 40132 (+)
Type: STP
Location: 39083 - 40132 (+)
Gene ID: k141_84340_37
Type: TC
Location: 40108 - 41061 (-)
Type: TC
Location: 40108 - 41061 (-)
Gene ID: k141_84340_38
Type: TC
Location: 41106 - 41909 (-)
Type: TC
Location: 41106 - 41909 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.