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Cluster: CGMR023366_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_3677 k141_3677_2 585 1913 + 2.A.1.1.106
STP k141_3677 k141_3677_3 1915 2775 + PfkB
CAZyme k141_3677 k141_3677_4 2801 4387 + GH172
TC k141_3677 k141_3677_5 4405 7341 + 1.B.14.6.1
pfam k141_3677 k141_3677_6 7353 8951 + SusD_RagB | SusD-like_3
CAZyme k141_3677 k141_3677_7 8935 10551 + GH183
CAZyme k141_3677 k141_3677_8 10574 12097 + GH183
Gene ID: k141_3677_2
Type: TC
Location: 585 - 1913 (+)
Gene ID: k141_3677_3
Type: STP
Location: 1915 - 2775 (+)
Gene ID: k141_3677_4
Type: CAZyme
Location: 2801 - 4387 (+)
Gene ID: k141_3677_5
Type: TC
Location: 4405 - 7341 (+)
Gene ID: k141_3677_6
Type: pfam
Location: 7353 - 8951 (+)
Gene ID: k141_3677_7
Type: CAZyme
Location: 8935 - 10551 (+)
Gene ID: k141_3677_8
Type: CAZyme
Location: 10574 - 12097 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_3677_2 vegan > omnivore 1.80206 0.00623
k141_3677_3 vegan > omnivore 2.10624 0.00623
k141_3677_4 vegan > omnivore 1.98532 0.00623
k141_3677_5 vegan > omnivore 2.08389 0.00623
k141_3677_6 vegan > omnivore 2.03951 0.00623
k141_3677_7 vegan > omnivore 2.03906 0.00623
k141_3677_8 vegan > omnivore 1.96302 0.00623

🧭 Explore Read Mapping of CGC

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