Cluster: CGMR023366_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023366
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_59799 | k141_59799_23 | 33216 | 34793 | + | GH20 |
| STP | k141_59799 | k141_59799_24 | 34884 | 35429 | + | Sigma70_r2 | Sigma70_r4_2 |
| pfam | k141_59799 | k141_59799_25 | 35646 | 36212 | + | Acetyltransf_1 | Acetyltransf_7 |
| TC | k141_59799 | k141_59799_26 | 36222 | 37292 | - | 2.A.98.1.3 |
Gene ID: k141_59799_23
Type: CAZyme
Location: 33216 - 34793 (+)
Type: CAZyme
Location: 33216 - 34793 (+)
Gene ID: k141_59799_24
Type: STP
Location: 34884 - 35429 (+)
Type: STP
Location: 34884 - 35429 (+)
Gene ID: k141_59799_25
Type: pfam
Location: 35646 - 36212 (+)
Type: pfam
Location: 35646 - 36212 (+)
Gene ID: k141_59799_26
Type: TC
Location: 36222 - 37292 (-)
Type: TC
Location: 36222 - 37292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_59799_24 | vegan > omnivore | 2.68547 | 0.04371 |