Cluster: CGMR017525_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR017525
- CGC Family ID: CGCFAM_00206
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_39242 | k141_39242_38 | 47507 | 48553 | - | GH43_24 |
| CAZyme | k141_39242 | k141_39242_39 | 48565 | 51333 | - | CBM67 | GH78 |
| CAZyme | k141_39242 | k141_39242_40 | 51350 | 52600 | - | GH175 |
| TC | k141_39242 | k141_39242_41 | 52656 | 54020 | - | 2.A.2.3.3 |
| TF | k141_39242 | k141_39242_42 | 54196 | 55182 | + | HTH_AraC | HTH_AraC |
| TC | k141_39242 | k141_39242_43 | 55899 | 57254 | + | 2.A.26.1.3 |
Gene ID: k141_39242_38
Type: CAZyme
Location: 47507 - 48553 (-)
Type: CAZyme
Location: 47507 - 48553 (-)
Gene ID: k141_39242_39
Type: CAZyme
Location: 48565 - 51333 (-)
Type: CAZyme
Location: 48565 - 51333 (-)
Gene ID: k141_39242_40
Type: CAZyme
Location: 51350 - 52600 (-)
Type: CAZyme
Location: 51350 - 52600 (-)
Gene ID: k141_39242_41
Type: TC
Location: 52656 - 54020 (-)
Type: TC
Location: 52656 - 54020 (-)
Gene ID: k141_39242_42
Type: TF
Location: 54196 - 55182 (+)
Type: TF
Location: 54196 - 55182 (+)
Gene ID: k141_39242_43
Type: TC
Location: 55899 - 57254 (+)
Type: TC
Location: 55899 - 57254 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter vanvlietii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.