Cluster: CGMR017525_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR017525
- CGC Family ID: CGCFAM_01910
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_47884 | k141_47884_24 | 21245 | 22585 | + | GH29 |
| TC | k141_47884 | k141_47884_25 | 22582 | 24213 | + | 3.A.1.5.20 |
| TC | k141_47884 | k141_47884_26 | 24301 | 25260 | + | 3.A.1.5.20 |
| TC | k141_47884 | k141_47884_27 | 25294 | 26199 | + | 3.A.1.5.20 |
| TC | k141_47884 | k141_47884_28 | 26224 | 27252 | + | 3.A.1.5.12 |
| TC | k141_47884 | k141_47884_29 | 27249 | 28244 | + | 3.A.1.5.20 |
Gene ID: k141_47884_24
Type: CAZyme
Location: 21245 - 22585 (+)
Type: CAZyme
Location: 21245 - 22585 (+)
Gene ID: k141_47884_25
Type: TC
Location: 22582 - 24213 (+)
Type: TC
Location: 22582 - 24213 (+)
Gene ID: k141_47884_26
Type: TC
Location: 24301 - 25260 (+)
Type: TC
Location: 24301 - 25260 (+)
Gene ID: k141_47884_27
Type: TC
Location: 25294 - 26199 (+)
Type: TC
Location: 25294 - 26199 (+)
Gene ID: k141_47884_28
Type: TC
Location: 26224 - 27252 (+)
Type: TC
Location: 26224 - 27252 (+)
Gene ID: k141_47884_29
Type: TC
Location: 27249 - 28244 (+)
Type: TC
Location: 27249 - 28244 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter vanvlietii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.