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Cluster: CGMR017525_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_43546 k141_43546_41 38012 38884 - 3.A.1.1.18
TC k141_43546 k141_43546_42 38904 39794 - 3.A.1.1.7
STP k141_43546 k141_43546_43 39877 41256 - SBP_bac_1
TF k141_43546 k141_43546_44 41509 42339 + HTH_AraC
CAZyme k141_43546 k141_43546_45 42450 44612 - GH112
TC k141_43546 k141_43546_46 44930 45781 + 3.A.1.144.1
pfam k141_43546 k141_43546_47 45778 46533 + ABC2_membrane | ABC2_membrane_3
TF k141_43546 k141_43546_48 46538 46912 + GntR
TC k141_43546 k141_43546_49 46918 47781 + 3.A.1.149.1
pfam k141_43546 k141_43546_50 47778 48437 + ABC2_membrane_5
TC k141_43546 k141_43546_51 48463 50553 - 3.A.3.32.3
Gene ID: k141_43546_41
Type: TC
Location: 38012 - 38884 (-)
Gene ID: k141_43546_42
Type: TC
Location: 38904 - 39794 (-)
Gene ID: k141_43546_43
Type: STP
Location: 39877 - 41256 (-)
Gene ID: k141_43546_44
Type: TF
Location: 41509 - 42339 (+)
Gene ID: k141_43546_45
Type: CAZyme
Location: 42450 - 44612 (-)
Gene ID: k141_43546_46
Type: TC
Location: 44930 - 45781 (+)
Gene ID: k141_43546_47
Type: pfam
Location: 45778 - 46533 (+)
Gene ID: k141_43546_48
Type: TF
Location: 46538 - 46912 (+)
Gene ID: k141_43546_49
Type: TC
Location: 46918 - 47781 (+)
Gene ID: k141_43546_50
Type: pfam
Location: 47778 - 48437 (+)
Gene ID: k141_43546_51
Type: TC
Location: 48463 - 50553 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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