Cluster: CGMR017525_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: CGMR017525
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33312 | k141_33312_18 | 14004 | 14306 | + | 4.A.3.2.6 |
| TC | k141_33312 | k141_33312_19 | 14329 | 15624 | + | 4.A.3.2.2 |
| TC | k141_33312 | k141_33312_20 | 15705 | 16049 | + | 4.A.3.2.4 |
| CAZyme | k141_33312 | k141_33312_21 | 16052 | 18370 | + | CBM67 | GH78 |
Gene ID: k141_33312_18
Type: TC
Location: 14004 - 14306 (+)
Type: TC
Location: 14004 - 14306 (+)
Gene ID: k141_33312_19
Type: TC
Location: 14329 - 15624 (+)
Type: TC
Location: 14329 - 15624 (+)
Gene ID: k141_33312_20
Type: TC
Location: 15705 - 16049 (+)
Type: TC
Location: 15705 - 16049 (+)
Gene ID: k141_33312_21
Type: CAZyme
Location: 16052 - 18370 (+)
Type: CAZyme
Location: 16052 - 18370 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter vanvlietii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.